WO2001001305A1 - Method and system for accessing medical data - Google Patents

Method and system for accessing medical data Download PDF

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Publication number
WO2001001305A1
WO2001001305A1 PCT/US2000/010727 US0010727W WO0101305A1 WO 2001001305 A1 WO2001001305 A1 WO 2001001305A1 US 0010727 W US0010727 W US 0010727W WO 0101305 A1 WO0101305 A1 WO 0101305A1
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WIPO (PCT)
Prior art keywords
recited
patient
medical data
diagnosis
collection
Prior art date
Application number
PCT/US2000/010727
Other languages
French (fr)
Inventor
Frank L. Madarasz
Ramarao Inguva
James K. Wyly
Joseph Milelli
David P. Krivoshik
Original Assignee
International Diagnostic Technology, Inc.
Priority date (The priority date is an assumption and is not a legal conclusion. Google has not performed a legal analysis and makes no representation as to the accuracy of the date listed.)
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Publication date
Application filed by International Diagnostic Technology, Inc. filed Critical International Diagnostic Technology, Inc.
Priority to AU42510/00A priority Critical patent/AU4251000A/en
Publication of WO2001001305A1 publication Critical patent/WO2001001305A1/en

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Classifications

    • AHUMAN NECESSITIES
    • A61MEDICAL OR VETERINARY SCIENCE; HYGIENE
    • A61BDIAGNOSIS; SURGERY; IDENTIFICATION
    • A61B5/00Measuring for diagnostic purposes; Identification of persons
    • A61B5/41Detecting, measuring or recording for evaluating the immune or lymphatic systems
    • A61B5/414Evaluating particular organs or parts of the immune or lymphatic systems
    • A61B5/415Evaluating particular organs or parts of the immune or lymphatic systems the glands, e.g. tonsils, adenoids or thymus
    • AHUMAN NECESSITIES
    • A61MEDICAL OR VETERINARY SCIENCE; HYGIENE
    • A61BDIAGNOSIS; SURGERY; IDENTIFICATION
    • A61B5/00Measuring for diagnostic purposes; Identification of persons
    • A61B5/41Detecting, measuring or recording for evaluating the immune or lymphatic systems
    • A61B5/414Evaluating particular organs or parts of the immune or lymphatic systems
    • A61B5/416Evaluating particular organs or parts of the immune or lymphatic systems the spleen
    • AHUMAN NECESSITIES
    • A61MEDICAL OR VETERINARY SCIENCE; HYGIENE
    • A61BDIAGNOSIS; SURGERY; IDENTIFICATION
    • A61B5/00Measuring for diagnostic purposes; Identification of persons
    • A61B5/41Detecting, measuring or recording for evaluating the immune or lymphatic systems
    • A61B5/414Evaluating particular organs or parts of the immune or lymphatic systems
    • A61B5/418Evaluating particular organs or parts of the immune or lymphatic systems lymph vessels, ducts or nodes
    • GPHYSICS
    • G16INFORMATION AND COMMUNICATION TECHNOLOGY [ICT] SPECIALLY ADAPTED FOR SPECIFIC APPLICATION FIELDS
    • G16HHEALTHCARE INFORMATICS, i.e. INFORMATION AND COMMUNICATION TECHNOLOGY [ICT] SPECIALLY ADAPTED FOR THE HANDLING OR PROCESSING OF MEDICAL OR HEALTHCARE DATA
    • G16H70/00ICT specially adapted for the handling or processing of medical references
    • AHUMAN NECESSITIES
    • A61MEDICAL OR VETERINARY SCIENCE; HYGIENE
    • A61BDIAGNOSIS; SURGERY; IDENTIFICATION
    • A61B5/00Measuring for diagnostic purposes; Identification of persons
    • A61B5/0002Remote monitoring of patients using telemetry, e.g. transmission of vital signals via a communication network
    • A61B5/0004Remote monitoring of patients using telemetry, e.g. transmission of vital signals via a communication network characterised by the type of physiological signal transmitted
    • A61B5/0013Medical image data
    • GPHYSICS
    • G16INFORMATION AND COMMUNICATION TECHNOLOGY [ICT] SPECIALLY ADAPTED FOR SPECIFIC APPLICATION FIELDS
    • G16HHEALTHCARE INFORMATICS, i.e. INFORMATION AND COMMUNICATION TECHNOLOGY [ICT] SPECIALLY ADAPTED FOR THE HANDLING OR PROCESSING OF MEDICAL OR HEALTHCARE DATA
    • G16H15/00ICT specially adapted for medical reports, e.g. generation or transmission thereof

Definitions

  • the present invention is a system for accessing medical data comprises a
  • FIG. 1 is a diagrammatic representation of the database architecture
  • FIG. 2 is a graphical representation of probability distribution for a
  • FIG. 3 is a graphical representation of the most probable distribution of
  • FIG. 4 is a graphical representation of probability distribution for various
  • FIG. 5 is a graphical of the most probable distribution of treatment
  • d conditioned on additional information, d, such as cost and insurance coverage
  • FIG. 6 is a high level view of a representative implementation of the SMDB
  • Veterinary medical data can provide veterinarians as well as breeders
  • SMDB DataBase
  • the SMDB will provide ready access to huge amounts of data either
  • a strength of the SMDB system is that when more sophisticated
  • the SMDB however, in any of its evolved stages, can be said to be self-
  • AI Logical AI, Inference, and Learning from Experience. Learning
  • the present invention add the use of
  • Bayesian Statistics The Bayesian Method specifically focuses on a
  • the present invention is not limited exclusively to the Bayesian Method for the Learning from Experience
  • FIG. 1 there is shown the static organizational structure
  • the SMDB has three major
  • Treatment segment 104 are primarily clinical in origin.
  • the solid circle 108 represents that
  • the striped portion 110 might be a similar portion accessible to the payer: basic
  • the SMDB is comprised of three
  • the D (Diagnostic) part 102 the T (Treatment — Outcome) part 104;
  • FIG. 1 is one where all three parts overlap, resulting in seven (7)
  • the D part 102 subdivides into the three-tuple of signs, symptoms, test
  • the ICD is a worldwide
  • the T part 104 contains maps that take Dx (and also separately a part of
  • the Outcome set is an
  • the M part 106 of course has members both in the D and T sets (but not
  • M part 106 may also contain, in
  • vector quantities i.e. a possible n-tuple of symptoms, tests, diseases, etc.
  • H(x) The symptoms and test results imply disease(s) x.
  • P(D 1 1) Probability Density for D.
  • the medical database system offers an estimation of P(H(x)
  • the query responses are a function of the number of symptoms that
  • the form also has options to choose
  • the software would also query the doctor if he wants to see an additional
  • the software gives details about the samples of patients and the response to a particular
  • SMDB updates occur in real time, allowing analysis and decision making at
  • Bayesian approach gives the posterior probability density as a function
  • SMDB can be implemented with a centrally located data base
  • the collection of patient records is hosted
  • the physician will be able to utilize the database in an efficient mode.
  • method employs downloading updates, such as when a patient's records are
  • Mr. Sam Jones is a 37-year-old married white male who presents with
  • Lymph nodes no cervical, supraclavicular, axillary, epitrochlear, or inguinal
  • HEENT Head, Ears, Eyes, Nose, Throat
  • Head normocephalic and atraumatic; no lesions noted.
  • Visual acuity is 20/20 bilaterally, and visual
  • Ears normal in appearance. Auditory canals clean and without lesions.
  • Frontal and maxillary sinuses nontender. e. Mouth and throat: lips without cyanosis or pallor. Buccal mucosa
  • Pharyngeal mucosa is
  • neck neck is supple, full range of motion. No evidence of tracheal deviation,
  • Carotid pulses are 2+, equal
  • Thyroid normal in size palpation reveals no nodules or masses.
  • Chest thorax is symmetric. Full expansion bilaterally. AP diameter is within
  • Lungs fremitus is equal bilaterally. Lung fields resonant throughout. Breath
  • Heart rate is 70 BPM and rhythm is
  • breasts are symmetric and of normal contour. Skin is of normal color
  • Nipples are of
  • Liver edge is felt approximately 1 inch below the right coastal margin;
  • the liver percuses to approximately 8 to 10 cm.
  • the spleen is not palpable.
  • popliteal, dorsalis pedis, and posterior tabialis pulses are 2+ and equal
  • Musculo skeletal exam reveals no joint deformities and full range of
  • nerves II to XII are within normal limits. Speech, memory, and expression are
  • Muscle strength is 5/5 in both upper and lower
  • Deep tendon reflexes are 2+ and equal bilaterally.
  • Throat culture and sensitivity including strep: rapid strep test (poor but
  • a PPD (TB test) is chosen, and planted. A mycobacteria culture is not
  • the data set is made up of the information contained in the seventeen (17) steps of
  • physician and/or the patient may have identified one or more
  • the new distribution is much narrower in the range of illnesses it spans and peaks
  • the patient will be treated as an outpatient.
  • the SMDB is accessed for presenting symptoms and signs. It is found that
  • the Patient Treatment Plan The Patient Treatment Plan
  • the return may be a suggested board range of treatments
  • the treatment plan may be tailored to conform to additional information.
  • This data set will contain
  • the SMDB will employ the Bayesian Methodology and construct the
  • the PPD is negative in two days: no action taken. Patient reports good
  • SMDB subsumes the typical medical record
  • FIG. 6 there is shown a representative implementation of the
  • a personal digital assistant 602 used by the care provider, contains client software and intelligent agents for providing user interfaces and
  • remote communication device 606 is coupled to a local computer system or server
  • the local computer system or server 608 accesses the SMDB server 610,

Abstract

A system for accessing medical data comprises a computer system (figure 6, item 608, item 610) providing access to a collection of clinical medical data (figure 6, item 610) and a means for querying the collection of clinical medical data (figure 6, item 608) to determine a diagnosis and probability of successful diagnosis for a patient based upon assessment of the patient to obtain medical data.

Description

METHOD AND SYSTEM FOR ACCESSING MEDICAL DATA
CROSS REFERENCES TO RELATED APPLICATIONS
This application is a continuation in part of United States Patent
Application Serial No. 09/495,185, entitled "Method And System For Accessing
Medical Data" filed on February 1, 2000, and claims the benefit of United States
Provisional Application Serial No. 60/117,509, filed on January 28, 1999 and
United States Provisional Application Serial No. 60/120,309, filed on June 25,
1999.
BACKGROUND OF THE INVENTION
With the enormous amount of information medical information, making a
decision on a factual basis is difficult. The collective experience of clinical
practice forms the basis of virtually all health care decision making. Until now a
readily accessible compilation of collective medical wisdom simply did not exist:
virtually all information, which found its way to efficient dissemination, was of the
research-results kind. While absolutely essential to support medical progress, this
kind of data is essentially useless in the day to day practice of optimum medicine.
There is a need to provide ready access to large amounts of medical data
either formerly unavailable or available in ways that were so cumbersome, or took
so long, as to prohibit any real utility. This ready access can support the query
prediction, diagnoses identification, etc., of the treating clinician. SUMMARY OF THE INVENTION
The present invention is a system for accessing medical data comprises a
computer system providing access to a collection of clinical medical data and a
means for querying the collection of clinical medical data to determine a diagnosis
and probability of successful diagnosis for a patient based upon assessment of the
patient to obtain medical data. A method is also described.
BRIEF DESCRIPTION OF THE DRAWINGS
A more complete understanding of the present invention may be obtained
from consideration of the following description in conjunction with the drawings in
which:
FIG. 1 is a diagrammatic representation of the database architecture;
FIG. 2 is a graphical representation of probability distribution for a
category of illnesses versus the range of illnesses in that category conditioned on
only symptoms and any prior information, P( Ψ | S I ) vs. Ψ;
FIG. 3 is a graphical representation of the most probable distribution of
illnesses conditioned on physical examination, laboratory tests, diagoses ruled out,
patient's medical history and any prior information, P( D | Ψ S' I ) vs. Ψ;
FIG. 4 is a graphical representation of probability distribution for various
treatments conditioned only on the determined set of symptoms, the most probable
illness (see Fig. 2.) and any other prior information P( T | Sf Ψp I ) vs. T; FIG. 5 is a graphical of the most probable distribution of treatment
conditioned on additional information, d, such as cost and insurance coverage,
patient's preferences, additional information concerning the patient his medical
history and medication reactions if not included in the prior information, I, P( T | d
Sf Ψp I ) vs. T; and,
FIG. 6 is a high level view of a representative implementation of the SMDB
system.
DETAILED DESCRIPTION OF VARIOUS ILLUSTRATIVE EMBODIMENTS
While the present invention method and system for accessing medical data
is particularly well suited for use with human patients and shall be so described, it
is equally well suited for use with other species. The present invention method and
system for accessing medical data offers significant advantages in the practice of
veterinary medicine as well as is generally applicable to treatment of any living
organism. Veterinary medical data can provide veterinarians as well as breeders
with a powerful tool in improving the health of particular animals as well as the
over all breed.
Clinical experience forms the proper basis to inform all decisions in health
care, but it must be collected and carefully monitored. While the financial, social,
and ethical issues must all be taken into account, these are areas already tracked
and the subjects of lively discussion. If, however, a physician, faced with a
presenting patient, wishes to know what the statistical experience of the last, say, 1000 patients so presenting has been, he is lost at sea. If that same physician,
having made a well founded diagnosis, wishes to know the treatment choices
made, and their relative outcomes of the last 1000 or so similarly diagnosed
patients, he is similarly lost. But it is precisely these kinds of data on which the
best medical decisions must be made. The development of the Smart Medical
DataBase ("SMDB") provides a resolution of this dilemma.
The SMDB will provide ready access to huge amounts of data either
formerly unavailable, or available in ways that were so cumbersome, or took so
long, as to prohibit any real utility. The very first advantages are the availability of
the data itself, and quick access in a clinically meaningful manner, made possible
by sophisticated sorting algorithms.
After an initial period, patterns of use, and feedback from users, will inform
future SMDB expansions and modifications to improve its utility. For example,
often-requested series of questions about a disease complex could be placed under
a single command. In addition to such changes, adaptive responses of the system
become part of the system itself.
At every stage the data that is used, and how it is used, is solely at the
discretion of the treating physician. The longstanding and widespread failure of so
called expert systems until now, such as those which read EEG's and EKG's, are
essentially sophisticated sorting programs, simply matching values of
multidimensional parameters with suggested diagnoses. A strength of the SMDB system is that when more sophisticated
"intelligent" functions are introduced, they are already in the statistical test bed in
which they may be evaluated for effectiveness. A new drug is evaluated by clinical
trials, undertaken after a very small research sampling of effect. The clinical trials
themselves, while wider in scope, still remain small relative to eventual field use.
After long-term use in the field, a much larger base of data becomes available
about efficacy, side effects, etc.
The SMDB however, in any of its evolved stages, can be said to be self-
testing without clinical risk. As data on the reliability and accuracy of a certain
SMDB function accumulate, then it become increasingly relied upon by the user
community. The ever-expanding database is always available in real time and
constantly up to date.
The decision-making capabilities of the Medical Protocol and its associated
database structure, to be described in detail below, come under the general heading
of AL What is proposed for the SMDB can be classified under specific
components of AI: Logical AI, Inference, and Learning from Experience. Learning
from Experience is the area of "smartness" in the SMDB. The tools most
commonly employed to implement this component are connectionism, neural
networks, semiotics, and fuzzy logic. The present invention add the use of
Bayesian Statistics. The Bayesian Method specifically focuses on a
predictive/learning capability. Moreover, its statistics are very well developed and
mature compared to the tools presently being used in AI. The present invention is not limited exclusively to the Bayesian Method for the Learning from Experience
component of the SMDB, but consider all viable tools used in AI and those to be
developed. However, it is a powerful method, uniquely different from the tools
presently employed in AI.
While clinicians, the care providers, are a primary target user of the present
invention, insurers and HMO's, the payers, can add their already formidable
financial data to the relevant subset of corresponding clinical information and
achieve a truly effective tool for clinically informed business management.
Similarly, the managers of organizations, as well as public policy makers, can use
the same comprehensive database to make policy decisions genuinely grounded in
reality.
The following symbols and abbreviations are used in this application:
C/C - Chief Complaint C/O - Complaining Of
Dx - Diagnosis
{ ... } - Set, or Collection of, ... ; as in {Dx}
F/U - Follow Up
Glu - Glucose Hx - History
NAD - No Apparent Distress
PE - Physical Exam
PT - Patient
R/O - Rule Out Sx - Symptom — Something patient brings you
Sign - Something elicited from patient by you
URI - Upper Respiratory Infection
WBL - White Blood Cell count WNL - With Normal Limits
Referring to Fig. 1: there is shown the static organizational structure
(architecture) of an embodiment of the SMDB. The SMDB has three major
divisions. The two represented by circles, the Diagnostic segment 102 and
Treatment segment 104 are primarily clinical in origin. The triangular portion 106
consists of that data driven by and collected about costs and payments. These
distinctions reflect the major source of the data in each segment: the multiple
overlapping diagrams indicates that whatever the source, portions of each division
will ultimately be of interest to everyone. The payer is interested in relative
treatment costs and their relation to efficacy, while the MD provider must
increasingly be aware of costs. For instance, the solid circle 108 represents that
small portion of data from all three sources to which the patient has direct access.
The striped portion 110 might be a similar portion accessible to the payer: basic
clinical and cost information without compromising patient confidentiality. There
are as many configurations as there are users.
In a more succinct mathematical approach, the SMDB is comprised of three
major parts: The D (Diagnostic) part 102; the T (Treatment — Outcome) part 104;
the M (MIS — Management Information Systems) part 106. The Venn diagram
picture shown in FIG. 1 is one where all three parts overlap, resulting in seven (7)
distinct pieces: the D, T, M, DT, DM, TM, and DTM.
The D part 102 subdivides into the three-tuple of signs, symptoms, test
results (SST) mapped into the diagnostic set Dx — this is most easily and productively seen as the ICD codes. (The symbol "D" represents one of three main
parts of the database itself, while the "Dx" represents a particular set, the set of
individual diagnoses, within that bigger part D.) The ICD is a worldwide
classification scheme, mostly descriptive but etiologic when it can be, that is used
for almost everything, including billing. The world uses ICD-10, while the USA
alone is still using ICD-9. Strictly, the mapping into is incorrect, since there are
three-tuple images without images in Dx, and members of Dx without inverse
images in the SST. D:Dx:(S,S,T)→Dx
The T part 104 contains maps that take Dx (and also separately a part of
SST) into the treatment set, Tx, (The same kind of relationship holds for the T and
Tx distinction as for the D and Dx sets above: T is a major segment of the data
base, and it contains, amongst many other things, the set of treatment protocols,
{Tx}) and then the T set of these maps to an Outcome set. The Outcome set is an
n-dimensional array with clinically relevant measures which may be in terms
unique to the Outcome set, but which may contain also members of the SST set:
e.g., normalization of white count; five year survival; return to pain-free state;
resolution of fever; normalization of vital signs, etc. The direct SST to treatment
maps describe symptomatic treatment with no ICD identity, admittedly a
somewhat rare occurrence. T:Dx- Tx— ^Outcome
The M part 106 of course has members both in the D and T sets (but not
all), while also having elements unique to itself. These latter contain all the usual
tools and measures typical of MIS systems, and a few unique to the SMDB. The idea associated with the seven pieces described above is being able to
have selective availability. For the majority of physicians, access to part D 102
and part T 104 will be dominant, while those managing their own practices might
have limited availability to part M 106. The harmonious union of clinical
management plus financial information comes from the fact that the billing aspect
of practice is where the two come together. An HMO or other insurer will be most
interested in the M section 106. Hospitals will take an interest in all three pieces,
and it is anticipated that most of Quality Assurance and Utilization Review (QA
and UR) functions will be subsumed and much more efficiently accomplished
using the SMDB organization. Notice that the M part 106 may also contain, in
addition to data, sophisticated tools now used by the industry.
It is anticipated that most of what is needed for all three parts is already
collected under the aegis of clinical record keeping and the billing function. Any
necessary changes will be almost resource-invisible in nature, mainly consisting in
changes to medical forms (including electronic), and how data is organized and
made selectively available (software changes).
A brief example follows to outline the basic aspects of the Bayesian
approach. The number for the probability for the disease is derived using standard
statistical tools as well as Bayes theorem. Let H be the hypothesis whose validity
is being examined. (Please note that in what follows all boldfaced symbols imply
vector quantities, i.e. a possible n-tuple of symptoms, tests, diseases, etc.) In other
words, H(x): The symptoms and test results imply disease(s) x.
Since the set of symptoms and test results are never exhaustive, the validity
of H in general has to be statistical based on evidence. The confidence in the
validity of H(x) is summarized by the quantity P(H(x)|DI) defined by
P(H(x)|DI) = Probability Density(confidence) that H(x) is
true.
Conditioned on the evidence D and prior information I,
D: Set of all symptoms and test results,
and as usual 0< P(H(x)|DI) < 1.
P(H(x)|DI) =1 implies 100% confidence in H(x)
P(H(x)|DI) = 0 implies H(x) is ruled out
The estimation of P(H(x)|DI) is done using Bayes theorem:
P(H(x)|DI) = P(D|H(x)I) P(H(x)|I) / P(D|I)
where
P(H(x)|I) = Prior probability density that H(x) is true based on
previous symptoms and tests on patients other than the one currently under
examination,
P(D|H(x)I) = Likelihood of H(x) based purely on current evidence.
Confidence based on current symptoms and tests,
and
P(D 1 1) = Probability Density for D. The medical database system offers an estimation of P(H(x)|I) using all the
information available in its database. It will also estimate the likelihood based on
current evidence. Based on the database it can also recommend what symptoms to
look for and what tests to order based on previous case histories.
The query responses are a function of the number of symptoms that
matched with the list of known symptoms for a particular disease state, the history
of the patient based on this match of the symptoms, and commonality characteristic
with symptoms in other illnesses. Unless requested this response uses the entire
sample of patient data on the database. The form also has options to choose
specifics that would restrict the sample by cross matching to selected demographic
and medical variables. The software to choose a sub-sample of the entire data set
and come up with a new real time response would then use this later option.
The software would also query the doctor if he wants to see an additional
list of symptoms that might increase the probability of a particular diagnosis. To
confirm the diagnosis the doctor in consultation with the patient might look for
additional symptoms over a stipulated time period, or order tests that might reveal
additional symptoms. He would then repeat, if necessary, the above procedure to
come to a firm decision as to the nature of the illness. At this stage we assume that
the doctor in consultation with the patient and through his software and additional
tests, has come to a decision regarding the illness.
Regarding the choice of treatments, the system presents the option of
running the treatments options menu. Depending on the menu choices, the software gives details about the samples of patients and the response to a particular
treatment as a function of time. It will present a number of statistical processing
results depending on the queries posed up by the doctor (chosen out of a list or
entered by the doctor) such as probability of cure versus probability of failure of
treatment. This is done interactively as a function of time. The software will give
a set of alternatives as a guide to proceed. It will also provide a list of contacts for
consultation should it prove necessary. It will also search additional databases
should further processing be necessary. If the doctor incorporates the patient
treatment and response into the software, it can in real time compare/match with
similar patient scenarios and give useful pieces of information such as
recommendations for midcourse change of medicines/treatment etc.,
The people authorized by the patient and doctor such as the on-call
physician will put the information on a web site for use. The doctor using the same
software can use a utility to post a question on the bulletin board, protecting the
patient's identity, to which other people on the network can respond.
SMDB updates occur in real time, allowing analysis and decision making at
the time and place of physician contact. In addition, correlations can be had
sorting for patients with constellations of illnesses and conditions, and all the
relevant probabilities of diagnoses, treatments, and outcomes derived for any
specialized situation. In this way the vast amount of accumulated clinical data may
be queried for the maximum it can inform about a particular patient. Two functions of the SMDB which will have increasing importance in the
future will be the telemetering of patient data via phone/cable lines to physicians'
offices and hospitals, and the transmission of lab results and imaging data for the
best expert interpretation. The former will be of use in both crisis management
(e.g. asthma attacks) and maintenance (e.g. blood pressure, glucose, or pulmonary
function monitoring).
Further along in a case, the SMDB will allow an informed analysis of failed
treatments and treatment alternatives.
Lastly, such a massive integration of clinical data will allow relatively
effortless retrospective studies of diagnostic accuracy, treatment efficacy, and
safety. It will permit, within confidentiality legislation and guidelines, the
convenient access of individual patient histories and data by those people and
agencies entitled to that data.
The Bayesian Statistical Approach
The Bayesian approach gives the posterior probability density as a function
of the prior density functions, while a utility function is used to order preferences.
These things are defined carefully in terms of our envisioned structure and possible
queries. Decisions relying on the Bayesian approach use the following:
A space of possible actions by the decider - the clinician.
• A space of possible patient states, diagnoses for example.
• A collection of possible experiments, or tests, or findings.
• A space of possible outcomes for these tests, experiments. • A utility function defined over all the possible consequences which defines
outcome preferences.
• The above are then used to "condition" the prior probability density
function as more results (information) become available, yielding the posterior
probability.
While SMDB can be implemented with a centrally located data base
accessed over a computer network such as the internet using, utilizing established
communication protocols and browser type interfaces, the present invention is also
equally well suited for a distributed architecture implementation.
The effective data compression provided by Bayesian Statistics lends itself
to a distributed architecture implementation. For example, millions of patient
records are reduced to sets of conditional probabilities, which only require 4-digit
resolution to be effective. Consider the following: a billion patient records can be
distilled into a table containing, perhaps 10,000 sets of conditional probabilities.
As the size of the database increases, the table values may change; however, the
size of the table is unchanged.
In one embodiment of the SMDB, the collection of patient records is hosted
on a network accessible, centralized system. Each user is provided with software
enabled to run on an individual computer or over a local network. The software
consists of the user interfaces; the algorithms described herein and the tabular
database of conditional probabilities and interactive diagnostic query responses.
Thus, the physician will be able to utilize the database in an efficient mode. There are several methods that can be used to update the database. One
method employs "push" type technology, wherein the central database sends, daily
updates of the tables as well as other relevant information to the user. Another
method employs downloading updates, such as when a patient's records are
uploaded to the SMDB central database. Either method is efficient as the updates
would be minimal in volume and typically only require a few seconds to transfer.
However, the simpler option of accessing the centralized SMDB, with a
simple browser, and performing the patient data upload and diagnostic
query/response mode is useful when physicians are away from an office
environment and can access the system using cell phone, personal digital assistant,
such as a palm pilot, or lap top computers.
The following is an simple exemplary embodiment of the SMDB and the
application of Bayesian Methodology to a Clinical Case.
Statement of Illness and Background Information on Patient
Mr. Sam Jones is a 37-year-old married white male who presents with
multiple upper respiratory complaints. He is new to this clinic secondary to his
having recently changed employers, and hence insurance carriers. He currently
works as a janitor at a local school. Chief Complaint: T have this cough, and my
throat is very sore.' Complains of night sweats, waking the patient two to three
times a night for the last three nights. Complains of cough, non-productive at first,
now with mucopurulent discharge, occasionally blood tinged, times five weeks.
Construct Initial Probability Distribution
P( Ψ | S I ) =
Conditional Probability for category of Illness - Ψ (Vector)
Conditioned on Symptoms Vector S and Any Other Prior Information
Concerning the Patient and Their Medical History
Any illness Ψ,, Ψ2, Ψ3, ... c Ψ and Ψp is likely. The Ψ.'s are a range of illnesses
that correspond to the stated symptoms given in S, and Ψp is the final outcome — a
specific illness with an associated probability of being true — of the analysis. The
result of this construct would typically look as that displayed in Fig. 2.
Medical Examination
Physical Examination
1. Vital signs
a. Blood pressure: 124/70
b. Pulse: 85
c. Respiration: 20 d. Temperature: 101 degrees Fahrenheit
2. General description: the patient is a 37 year old married white male who looks
his stated age; he is pleasant, appears well nourished, and seems in an overall
good state of health.
3. Skin: warm and dry; turgor adequate; color normal. There is no icterus,
purpura, rash, or unusual pigmentation noted. Hair normal in appearance,
distribution, texture.
4. Lymph nodes: no cervical, supraclavicular, axillary, epitrochlear, or inguinal
adenopathy.
5. HEENT (Head, Ears, Eyes, Nose, Throat):
a. Head: normocephalic and atraumatic; no lesions noted.
b. Eyes: cornea without lesions, conjunctiva clear, sclera white. Pupils
are equal, 3mm in diameter, round, reactive to light and accomodation.
Extraocular movements within normal limits without nystagmus or
strabismus. Fundii are benign. Disks well delineated. There are no
hemorrhages or exudates. Visual acuity is 20/20 bilaterally, and visual
fields are within normal limits to confrontation.
c. Ears: normal in appearance. Auditory canals clean and without lesions.
Tympanic membranes intact. Hearing adequate.
d. Nose: septum within normal limits and without deviation. Nasal
mucosa pink and without abnormal discharge. No nasal polyps or
other lesions. Frontal and maxillary sinuses nontender. e. Mouth and throat: lips without cyanosis or pallor. Buccal mucosa
normal in appearance. Teeth in good condition. Tongue without
lesions or tremor, protrudes midline. Pharyngeal mucosa is
erythematous and without other lesions, exudates, or evidence if
inflammation. Gag reflex intact.
6. Neck: neck is supple, full range of motion. No evidence of tracheal deviation,
jugular venous distension, or lymphadenopathy. Carotid pulses are 2+, equal
bilaterally, and without bruits. Carotid upstroke is within normal limits.
Thyroid normal in size, palpation reveals no nodules or masses.
7. Back: spinal curvature is normal; no scoliosis, kyphosis, or tenderness. Full
range of motion present.
8. Chest: thorax is symmetric. Full expansion bilaterally. AP diameter is within
normal limits.
9. Lungs: fremitus is equal bilaterally. Lung fields resonant throughout. Breath
sounds and voice sounds normal. There are no rales or ronchi, but some end-
expiratory wheezes throughout, more prominent in the bases bilaterally.
10. Heart: palpation reveals no heaves or thrills. The PMI (point of maximum
impulse) is medial to the midclavicular line, fourth intercostal space.
Auscultation reveals SI, S2, of normal intensity. There are no S3, S4, rubs,
clicks, or other abnormal heart sounds. Heart rate is 70 BPM and rhythm is
regular. 11. Breasts: breasts are symmetric and of normal contour. Skin is of normal color
and appearance; there is no edema, ulceration or erythema. Nipples are of
normal size and shape; there is no nipple retraction, ulceration or discharge.
Palpation does not reveal any tenderness or masses.
12. Abdomen: normal size and contour. There are no capillary dilatations, skin
lesions, or surgical scars. Auscultation reveals normative bowel sounds and no
abdominal bruits. Palpation reveals no abdominal tenderness, guarding, or
masses. Liver edge is felt approximately 1 inch below the right coastal margin;
it is firm, sharp, and smooth. The liver percuses to approximately 8 to 10 cm.
total span. The spleen is not palpable.
13. Rectal exam: no external anal lesions. Sphincter tone normal. No internal or
external hemorrhoids. Rectal mucosa appears normal, with no nodules or
masses present. Stool is brown and negative for occult blood.
14. Genitalia: inspection reveals normal distribution of pubic hair. No lesions or
discharges. No external lesions. Testes are descended, nontender, of normal
size, without nodules or masses.
15. Inguinal area: no lymphadenopathy noted. Femoral pulses are 2+ and equal
bilaterally. Auscultation reveals no femoral bruits.
16. Extremities: there is no clubbing, cyanosis, or edema. Brachial, radial,
popliteal, dorsalis pedis, and posterior tabialis pulses are 2+ and equal
bilaterally. Musculo skeletal exam reveals no joint deformities and full range of
motion. There is no bone, joint, or muscle tenderness noted. 17. Neurologic: patient is alert and oriented to time, person, and place. Cranial
nerves II to XII are within normal limits. Speech, memory, and expression are
within normal limits. Muscle strength is 5/5 in both upper and lower
extremities. There is no muscle atrophy or involuntary movement noted.
Testing of cerebella function reveals normal gait, negative Romberg test, and
good coordination in finger-to-nose, heel-to-shin, and alternate motion testing.
Sensory is intact to light touch, pain, and vibratory stimuli. There are no focal
motor/sensory deficits. Deep tendon reflexes are 2+ and equal bilaterally.
Chosen Tests Include:
1. Throat culture and sensitivity (including strep): rapid strep test (poor but
widely used) is negative. 24 and 48 hour cultures are positive for
streptococcus sensitive to a wide range of older antibiotics. Mycoplasma
culture will take a week or more to return, somewhat more difficult to do
reliably, and is not chosen.
2. Chest X-ray, PA and LAT (back to front and side views). The pictures
show very light patchy bilateral infiltrates, without consolidation.
3. A PPD (TB test) is chosen, and planted. A mycobacteria culture is not
chosen (possibly a mistake) at this time.
The Diagnoses to be Ruled Out Include:
1. Strep infection
2. Pneumonia
3. Residual mycoplasma infection 4. Mycobacteria infection (tuberculosis)
Construct Data Set (Vector) D and New Symptoms Vector S'
The data set is made up of the information contained in the seventeen (17) steps of
the Physical Examination, that obtained from the three (3) Laboratory Tests and
from the four (4) Diagnoses Ruled Out:
D = {(D,, D2, ... D17 — Physical Exam), (D18 D19, D20 — Lab Tests),
(D21 D22, D23, D24— Ruled Out)}
In addition, the physician and/or the patient may have identified one or more
symptoms not initially reported. The symptoms vector must be updated:
S' = S + Additional Symptoms Observed.
Construct a New Probability Distribution for the Illness Ψ Using D, S' and Bayes' Theorem
P( Ψ | D S' I ) =
Conditional Probability for Reduced Range of Illnesses - Ψ (Vector) Conditioned on New Data D, Updated Symptoms Vector S' and Any Other Prior
Information Concerning the Patient and Their Medical History
P( Ψ I D S' I ) = [P( D I Ψ S' I ) P( ψ I S' I )] / P( D | S' I ),
where
P( Ψ I S' I ) = Prior probability density that Ψ is true based on
previous symptoms and tests on patients other than the one currently under
examination, P( D I Ψ S' I ) = Likelihood of Ψ based purely on current evidence.
Confidence based on current symptoms and tests,
and
P( D I S' I ) = Probability Density for D.
The new distribution is much narrower in the range of illnesses it spans and peaks
about the most probable illness, Ψp as illustrated in Fig. 3. At this point, the
physician, based on other past case experiences with similar symptoms and/or
professional instinct, has an option of selecting the most probable illness, Ψp, to
treat or one of a small number of other illnesses within a nominal 0.99 probability
"threshold" as indicated in Fig. 3.
A Presumptive Diagnoses of possible strep infection, possible mycoplasma
infection is made. Less likely is TB. The patient will be treated as an outpatient.
The SMDB is accessed for presenting symptoms and signs. It is found that
in the last 30 days there have been 19 cases of students or staff of that school
diagnosed with mycoplasma infection. This makes the diagnoses now
overwhelmingly likely.
All have responded to a course of erythromycin (not universally true for
this infection). Inhaled bronchodilators, and inhales steroids.
The Patient Treatment Plan
The SMDB is designed to be an effective tool in helping to select a course
of treatment for the patient. Two in puts are needed: the most probable illness, Ψ ,
and a final determined set (vector) of symptoms, Sf, which may be identical to S'. When this information is put into the SMDB it returns a probability distribution of
treatment, T,
P( T | Sf Ψp I ) =
Conditional Probability of Treatment(s), T
Conditioned on Symptoms Vector Sf and Any Other Prior Information I
Concerning the Patient, His Medical History Including Medication
Information
As illustrated in Fig. 4, the return may be a suggested board range of treatments,
T„ T2, ... .
Tailoring the Treatment Plan
The treatment plan may be tailored to conform to additional information.
First a new data set (vector), d, is constructed. This data set will contain
information such as simplicity of treatment, cost and insurance coverage, patient's
preferences, additional information concerning the patient his medical history and
medication reactions if not included in the prior information, I, etc., etc. From this
information the SMDB will employ the Bayesian Methodology and construct the
most probable distribution of treatments.
P( T I d Sf Ψp I ) = [P( d I T Sf Ψp I ) P( T I Sf Ψp I )] / P( d I Sf I ),
where
P( T I Sf Ψp I ) = Prior probability density that T is true based on the
determined illness, Ψf, the symptoms, Sf, associated with Ψf and other prior
information, I. P( d I T Sf I ) = Likelihood of T based on no directly knowledge of
Ψ .
and
P( d I Sf I ) = Probability Density for d.
The new distribution is much narrower in the range of treatments it spans and
peaks about the most probable illness, Tp as illustrated in Fig. 5. At this point, the
physician, based on other past case experiences with similar situations and/or
professional instinct, has an option of selecting the most probable treatment, Tp, or
one of several other treatments that nominally fall within 0.99 probability
"threshold" as indicated in Fig. 5.
A course of erythromycin (both because of the above information, and to
nail the last doubt about a possible strep infection, and helping to prophylax against
the latter).
• A two week course of an inhaled bronchodilator.
• A two week course of an inhaled steroid.
• Return in two days to have PPD read.
• Return in two weeks for follow up and to schedule an initial intake to the
service.
The PPD is negative in two days: no action taken. Patient reports good
symptomatic relief with the inhaled medication. Two-week follow up shows a satisfactory resolution of symptoms:
productive cough is absent times 8 days; patient is afebrile. Lungs are now clear.
No follow up chest X-ray is needed. Oropharynx is now clear with no erythema.
Update/Upgrade SMDB
This patient's medical event now become part of the SMDB, and hence part
of the knowledge informing subsequent decisions for other uses of the SMDB.
While this case does not involve life and death issues, as do cancer
diagnosis and treatment, it is sufficient to illustrate the utility of the present
invention SMDB. Unless the treating team was directly involved in the other cases
from the school, or had prescient knowledge about them, this confirmatory data
would not be available. While in this case the resulting benefits included higher
confidences in diagnosis and treatment, increased treatment efficacy, lower
resource consumption all around, (all worthwhile goals), in most cases in the
management of serious chronic illness, these advantages will accrue a thousand
fold more. In addition, the issues of quality of life, morbidity and mortality,
resource availability, access to treatment, are all vitally important areas, which will
see significant benefits from the SMDB function.
Moreover, a portion of the SMDB subsumes the typical medical record and
administrative record functions. This alone will not only enhance those roles, but
also reduce costs involved with them.
Referring to Fig. 6 there is shown a representative implementation of the
SMDB system. A personal digital assistant 602, used by the care provider, contains client software and intelligent agents for providing user interfaces and
communicates by a wireless link 604 to a wireless communication device 606. The
remote communication device 606 is coupled to a local computer system or server
608. The local computer system or server 608 accesses the SMDB server 610,
through the Internet, dedicated network, or other suitable communication links.
Numerous modifications and alternative embodiments of the invention will
be apparent to those skilled in the art in view of the foregoing description.
Application to systems of other living organisms as well as electro/mechanical
systems having non specific diagnosis for failure or problems are within the scope
of the invention. Accordingly, this description is to be construed as illustrative
only and is for the purpose of teaching those skilled in the art the best mode of
carrying out the invention. Details of the structure may be varied substantially
without departing from the spirit of the invention and the exclusive use of all
modifications which come within the scope of the appended claim is reserved.

Claims

WHAT IS CLAIMED:
1. A method for accessing medical data comprising the steps of:
assessing a patient to obtain medical data;
accessing a collection of clinical medical data;
querying the collection of clinical medical data; and
determining a diagnosis and corresponding probability of successful
diagnosis for the patient;
wherein said corresponding probability of successful diagnosis is defined
by P(H(x)|DI), probability density that said diagnosis, H(x), is true, said diagnosis
H(x) is a function of symptoms and test results x, D represents evidence and I
represents prior information.
2. The method as recited in claim 1 wherein the step of accessing the
collection of clinical medical data utilizes a computer network.
3. The method as recited in claim 2 wherein said computer network is a global
computer network.
4. The method as recited in claim 1 wherein the collection of clinical medical
data is distributed.
5. The method as recited in claim 1 wherein P(H(x)|DI) is estimated using
Bayes theorem.
6. The method as recited in claim 1 wherein P(H(x)|DI) is estimated as
P(D|H(x)I) P(H(x)|I) / P(D|I), where P(H(x)|I) is prior probability density that
H(x) is true, P(D|H(x)I) is likelihood of H(x) based on current evidence and
P(D 1 1) is probability density for D.
7. The method as recited in claim 1 wherein the patient is a human.
8. The method as recited in claim 1 wherein the patient is an animal.
9. A system for accessing medical data comprising:
a computer system providing access to a collection of clinical medical data;
and
a means for querying the collection of clinical medical data to determine a
diagnosis and corresponding probability of successful diagnosis for a patient based
upon assessment of the patient to obtain medical data;
wherein said corresponding probability of successful diagnosis is defined
by P(H(x)|DI), probability density that said diagnosis, H(x), is true, said diagnosis
H(x) is a function of symptoms and test results x, D represents evidence and I
represents prior information.
10. The system as recited in claim 9 wherein access to the collection of clinical
medical data utilizes a computer network.
11. The system as recited in claim 10 wherein said computer network is a
global computer network.
12. The system as recited in claim 9 wherein the collection of clinical medical
data is distributed.
13. The system as recited in claim 9 wherein P(H(x)|DI) is estimated using
Bayes theorem.
14. The system as recited in claim 9 wherein P(H(x)|DI) is estimated as
P(D|H(x)I) P(H(x)|I) / P(D|I), where P(H(x)|I) is prior probability density that
H(x) is true, P(D|H(x)I) is likelihood of H(x) based on current evidence and
P(D 1 1) is probability density for D.
15. The system as recited in claim 9 wherein the patient is a human.
16. The system as recited in claim 9 wherein the patient is an animal.
17. The system as recited in claim 9 wherein the computer is a personal digital
assistant.
18. The system as recited in claim 9 wherein the means for querying the
collection of clinical medical data utilizes a wireless communication interface.
PCT/US2000/010727 1999-06-25 2000-04-20 Method and system for accessing medical data WO2001001305A1 (en)

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US49518500A 2000-02-01 2000-02-01
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